WormBase Tree Display for Variation: WBVar00230670
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| WBVar00230670 | Name | Public_name | WBVar00230670 | ||
|---|---|---|---|---|---|
| Other_name | pas42446 | ||||
| cewivar00016069 | |||||
| Y46G5A.19a.1:c.664+465C>G | |||||
| Y46G5A.19b.1:c.665-191C>G | |||||
| HGVSg | CHROMOSOME_II:g.12809085C>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y46G5A | |
| Flanking_sequences | gaaaatcaatttatggagttttaacttgattttgattaaattttgaaggttttagcaaagaaaaatatgttttgggattagtttaataaattacactaaaaaataaatttggaaaccaagaaaaaaacagtggaaactaaaaaaaattaaaaattattgttactgtaggctattaaaggatcataggcggcaatatgcagcgggtctcgtcacgaaaactaatttatggagttttcagcttaattttcatataattttgaagttttttaaaacagaaaaattcaattttaggagattatg | tgaattacattttgaaaccaagaaaatcagtgtaacgaaaaaaagaaactggttactgtaagactttaaaggcgcatatgctgaattcgaaggaataaaattgattttgaattgtttttttcgattgaaaaacttgaaaaaaaaatcacgtgactaaatttatttctttactctaaagaaatccttctaggcgaatgcccatggctagacatgaagctcatctctaccgtaatccattcggctcgtgacctatttcccgtggcaaagtacgcggttggcagcgtgccaacctacacgtca | |||
| Mapping_target | Y46G5A | ||||
| Type_of_mutation | Substitution | C | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (71) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01441053 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00012909 | |||
| Transcript | Y46G5A.19b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y46G5A.19b.1:c.665-191C>G | ||||
| Intron_number | 4/6 | ||||
| Y46G5A.19a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y46G5A.19a.1:c.664+465C>G | ||||
| Intron_number | 5/7 | ||||
| Method | WGS_Pasadena_Quinlan |
