WormBase Tree Display for Variation: WBVar00230347
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WBVar00230347 | Name | Public_name | WBVar00230347 | ||
---|---|---|---|---|---|
Other_name | pas42123 | ||||
cewivar00096173 | |||||
Y17G7B.10a.1:c.-147-2150A>T | |||||
Y17G7B.10a.4:c.-147-2150A>T | |||||
Y17G7B.10a.2:c.-6+2903A>T | |||||
HGVSg | CHROMOSOME_II:g.12052543A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y17G7B | |
Flanking_sequences | cgtggcgagacccagagattgatcgaaacgtgcatttctggaagttgttatgctctccgcagccacgttacgttatctcaagctacaataaactgtgaagcttcggaaacatgtgctcttacgtgtagtcagctggtggagcctcttaactgaccaatcgatgaacagtgataagaaatcgtttaacagttgacggtgtgttgaatcgaacagtttcaattcgaaaagtgtaatgttttcttttttagttgacattatatatttcttttcgaacagggatttttctataccgggtttttt | aaaattactcctcagtagggttgcaacaatagctataacagaattctatgtactgtaaatttctaaaatagattttagtatacttatgagtatactaactcttaatttactaatcaaattaattaaaacagttttttggatttatcgataataatttgaaaaacaattggcccagttacagaaaaatctgggctttttggcctccgcgagcttggcccttcaactgaacttttccactcagtcagatcaaataacgaaactttgtttaccactgtactgaaaataatgctgcccccaaaa | |||
Mapping_target | Y17G7B | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (101) | |||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01440377 | |||
Status | Live | ||||
Affects | Gene | WBGene00012463 | |||
Transcript | Y17G7B.10a.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.10a.2:c.-6+2903A>T | ||||
Intron_number | 1/8 | ||||
Y17G7B.10a.4 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.10a.4:c.-147-2150A>T | ||||
Intron_number | 1/10 | ||||
Y17G7B.10a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.10a.1:c.-147-2150A>T | ||||
Intron_number | 1/9 | ||||
Method | WGS_Pasadena_Quinlan |