WormBase Tree Display for Variation: WBVar00230121
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| WBVar00230121 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00230121 | |||
| Other_name | pas41897 | ||||
| cewivar00096064 | |||||
| CE19041:p.Phe262= | |||||
| Y17G7B.8.1:c.786C>T | |||||
| HGVSg | CHROMOSOME_II:g.12026288G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y17G7B | |
| Flanking_sequences | gggcacatccattccagatcgcaggtctggaaaataattgaaaatttttggaaccctaaaaaatttctaatttcgaaaattaagtttttttttgctaaaaaatttttaaaatttaaaaaattcgattttttatcgaaaaataaccccatcccgttcattaaaatccttgggatcccccacaaaaatcgatattccacattttgtgaatttcacgaaaatccacaatttcaaattgatcggacttttacgaatcgagtgattctcgaatttttcaaacatttcctggcggaaaatctggcg | aataatctttcagcgactggcacgtggaatccagggaaccagtgacttcgcttcatcggacgcgatagaattctctggaaaatgtgaagttttggcgggaaaaactaggatgaaaacgcgatctattgagaatttcgactttaaacggcttttttcttgaaaaattttgaaaaaaatccggtgaaagcgcgctctaatgagagatttcgttagagcgcgtttacaaaacttacagccatatacatcaccggctcaatttcatcataggcagtgaagtgctcgaagtctgaatatgttgaa | |||
| Mapping_target | Y17G7B | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (170) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01440350 | |||
| WBVar01377721 | |||||
| WBVar01246133 | |||||
| WBVar01313075 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00012462 | |||
| Transcript | Y17G7B.8.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y17G7B.8.1:c.786C>T | ||||
| HGVSp | CE19041:p.Phe262= | ||||
| cDNA_position | 787 | ||||
| CDS_position | 786 | ||||
| Protein_position | 262 | ||||
| Exon_number | 5/7 | ||||
| Codon_change | ttC/ttT | ||||
| Amino_acid_change | F | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
