Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00229840

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00229840EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00229840
Other_namepas41616
cewivar00095692
F43G6.4.1:c.241+1681T>A
HGVSgCHROMOSOME_II:g.11792684T>A
Sequence_detailsSMapS_parentSequenceF43G6
Flanking_sequencesgtaaatgaaaatgttgcagtgtgtgtgtatcaagtcgtaaaattgaacacacgcctcaacagagagagtcgtaattcaaagtcatcgcaacacccggcagaaggagcgagcgagagagagaacatgatgacagaattatgagggaatgtacacacaggtgcaccaaaagttcgaggacactagtcatcatcggaaggcgcgcgaaacgagctttgaagttttttgtggagtgggttgcgtaatgaaggtgttggacaggttgcatcagtgcaaaattgaaagagataccgattggggattagctgtgagaggtgtcacttcttgcacagttcattttcaatatgtcgatcaggatctctgcagaattcgcatgatgggcacaccacaacttctccatcgggctcacataggcattgtgtacatattgcgatttaactctgaacgtctcgaaaacaggaaaaccccattagttcttggaatgaaaagttgggggaggttttccgtggaaagtgtatgtttttgctgagcgcccgagagttgatatattatgcgcgaacgagtcccaacgtcccaggggtatatcgacaggcggcgacttca
Mapping_targetF43G6
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (131)
LaboratoryAX
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
WGS_De_Bono
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01440223
WBVar01245405
StatusLive
AffectsGeneWBGene00009657
TranscriptF43G6.4.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF43G6.4.1:c.241+1681T>A
Intron_number2/7
ReferenceWBPaper00037807
MethodWGS_Pasadena_Quinlan