WormBase Tree Display for Variation: WBVar00229616
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| WBVar00229616 | Name | Public_name | WBVar00229616 | ||
|---|---|---|---|---|---|
| Other_name | pas41392 | ||||
| cewivar00095316 | |||||
| CE03768:p.Leu35= | |||||
| W02B12.8a.1:c.105C>A | |||||
| HGVSg | CHROMOSOME_II:g.11465001C>A | ||||
| Sequence_details | SMap | S_parent | Sequence | W02B12 | |
| Flanking_sequences | cacctcacgctgcaatccatctgacacatgttttcaaacatattgattggtcattatatatgcctacttattatatgatatttattatacgaatcattttcttagaaacttaaaatatttccaaattctcaagtgtgtgtagtcaattaccttgcccctgtcttaatgaaaatttcactgttaagattttcagcaaatggacacgaaacatcctccggatccatcaggtccatcagatcccaacataaatcttggagaattcgaagatccggtggatggctatgccgatgatgaccttct | acaccggatgacctaagcggtaagtggaataataattattgatatttaatttaatagaaaactggtttatttcagtaagtgtcactggaatgacgccatctcgatcgtttctggaaactgaagaattcgagacagagcttggaggtgttgaaccgttcgaagatcttttcaacgacatatcagctcacgaaattattcaagtaattgctgatggggatcgagttggaaggtaaattaatttgaatccaaaaattaattatcttttttgttttaatgaatcatagtttgcaggccaattgt | |||
| Mapping_target | W02B12 | ||||
| Type_of_mutation | Substitution | C | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (77) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01440010 | |||
| WBVar01440011 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00305636 | |||
| WBGene00012203 | |||||
| Transcript | W02B12.8a.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | W02B12.8a.1:c.105C>A | ||||
| HGVSp | CE03768:p.Leu35= | ||||
| cDNA_position | 108 | ||||
| CDS_position | 105 | ||||
| Protein_position | 35 | ||||
| Exon_number | 2/11 | ||||
| Codon_change | ctC/ctA | ||||
| Amino_acid_change | L | ||||
| W02B12.19 | |||||
| Method | WGS_Pasadena_Quinlan |
