WormBase Tree Display for Variation: WBVar00229589
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| WBVar00229589 | Name | Public_name | WBVar00229589 | ||
|---|---|---|---|---|---|
| Other_name | pas41365 | ||||
| uCE2-2012 | |||||
| haw133206 | |||||
| cewivar00095267 | |||||
| C05D12.1.1:c.720T>A | |||||
| CE36973:p.Arg240= | |||||
| C05D12.1.2:c.720T>A | |||||
| HGVSg | CHROMOSOME_II:g.11413777A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C05D12 | |
| Flanking_sequences | gataaaaaatgaacaaaacacatatcacttgaattacaactgacagaatcatcatatcacgatgaagctgaaaatttatattttcattttatcaaaacatcaaaatttctaaaacttacttgaaaccaaactgcagtgccaagaagcttatttctcgggaacagtggtttaaagtatctgctgattaggatggcatttgatgcaagtacccaccatgcaaacatcaggagaattccttaaacgatcaaggattttattgaaaaaaaattcttatggaaccgtaccatgccagacagcaat | cggtacctccagtatcttgagacattataggtttgtcgcatttccccgatatggtaaaggtttggtgatgagcaatttgttcggcagaatgacacctgctcatctgacatccaagggaattgttgaccgtcatttgttgagtgaatgtctttttcaagggctgtaaaatgggaaggtttggtaaaagtactgtaggaaggcacagacgttcaaaagcagtagattacaaattaatttaccgacaaatacaacctcagtgagcagatttctaggattttattaggcacccaagaaatttcc | |||
| Mapping_target | C05D12 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (157) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Swan | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01439972 | |||
| WBVar01244836 | |||||
| WBVar00553071 | |||||
| WBVar01376750 | |||||
| WBVar01311900 | |||||
| WBVar00269048 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00007339 | |||
| Transcript | C05D12.1.2 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | C05D12.1.2:c.720T>A | ||||
| HGVSp | CE36973:p.Arg240= | ||||
| cDNA_position | 787 | ||||
| CDS_position | 720 | ||||
| Protein_position | 240 | ||||
| Exon_number | 7/14 | ||||
| Codon_change | cgT/cgA | ||||
| Amino_acid_change | R | ||||
| C05D12.1.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | C05D12.1.1:c.720T>A | ||||
| HGVSp | CE36973:p.Arg240= | ||||
| cDNA_position | 830 | ||||
| CDS_position | 720 | ||||
| Protein_position | 240 | ||||
| Exon_number | 7/14 | ||||
| Codon_change | cgT/cgA | ||||
| Amino_acid_change | R | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| WBPaper00005369 | |||||
| Method | WGS_Pasadena_Quinlan |
