WormBase Tree Display for Variation: WBVar00229536
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| WBVar00229536 | Name | Public_name | WBVar00229536 | ||
|---|---|---|---|---|---|
| Other_name | pas41312 | ||||
| haw133157 | |||||
| cewivar00095177 | |||||
| CE02107:p.His111= | |||||
| B0491.5.1:c.333C>T | |||||
| HGVSg | CHROMOSOME_II:g.11345153G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | B0491 | |
| Flanking_sequences | ttaatctagtcttacacaaaattccagcatacttggcggcggcaagtcctttccagaaagatccctcattgagtggactgtcgaagaaacggggtccggcaggataccaagagtttggcaacacggcgtttctgcctaactcgtcctttggagctggaaataaaaaagttttgtagcaggatacttataataaaattttaattattcctcacttagcatattatcgctcaaggttggactaacggatagtcctggatgctctttgctgattccaaacttttcagcgatagccttaaactg | tgggatccttcgtaaactttgttctggaattcggacagctctcctggctgatctccttttttggtgagatttttggtcttcttggaatcgagtccgaaaggtccggccagggattctccgtcttttacctgaaaacgcaaaaaattagcgaatatcactcaaaataaattaactgtacctttggatcataccaatctggatcttcctcacggaaacgagcacgataaagacgaagttttccagaacgcgtgacagagtcttcaagtcctggctccttccaccagtcggcacgtcccttgc | |||
| Mapping_target | B0491 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (162) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01376668 | |||
| WBVar01439930 | |||||
| WBVar01244749 | |||||
| WBVar00553022 | |||||
| WBVar01311781 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00007192 | |||
| Transcript | B0491.5.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | B0491.5.1:c.333C>T | ||||
| HGVSp | CE02107:p.His111= | ||||
| cDNA_position | 338 | ||||
| CDS_position | 333 | ||||
| Protein_position | 111 | ||||
| Exon_number | 4/8 | ||||
| Codon_change | caC/caT | ||||
| Amino_acid_change | H | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
