WormBase Tree Display for Variation: WBVar00228896
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WBVar00228896 | Evidence | Paper_evidence | WBPaper00005369 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00228896 | |||
Other_name | pas40672 | ||||
uCE5-3159 | |||||
cewivar00114617 | |||||
CE38114:p.Val271= | |||||
Y113G7B.9.1:c.813T>C | |||||
HGVSg | CHROMOSOME_V:g.20207832T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y113G7B | |
Flanking_sequences | ataatggtttttgtaatacaatattctaggcgaatcgtctagctctcctcgacacgtgtactgtgcttctgtttgattttcttccagcattctgtggacatatgtggcctactgcaccaatgttttcttttaatgtaagttagtgttaatattatatctaaacaacataatttacttaaaaagtaccaatttgcaaaactggcattatttatgctcaacattgttgcagaacgtcggttcctacaacccggtgctgaaaatcacaggatgcgcaattgagtcgactgttgtaactagggt | ctgcttttcagaacacctgagaactctgccagtactccagtgtttgcgaaaaccctgaaaaattctgaagtttgataaattacgggaaaacaaaattctgagaatgcgtactgcgtaacatatttgactcgaaaagtttctcatatggtcaactacagtaattctttaaatgacaactgtagcgcttgatgtgagccgatttaaaaatattcacaatttctgagatttgataaataaattgcattgttcggaattttgttttcactctcttgttgttaaaagaacgttatcttcttccct | |||
Mapping_target | Y113G7B | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (28) | |||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
SNP_Swan | |||||
History | Acquires_merge | WBVar00273625 | |||
Status | Live | ||||
Affects | Gene | WBGene00013760 | |||
Transcript | Y113G7B.9.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y113G7B.9.1:c.813T>C | ||||
HGVSp | CE38114:p.Val271= | ||||
cDNA_position | 1165 | ||||
CDS_position | 813 | ||||
Protein_position | 271 | ||||
Exon_number | 7/7 | ||||
Codon_change | gtT/gtC | ||||
Amino_acid_change | V | ||||
Reference | WBPaper00005369 | ||||
Method | WGS_Pasadena_Quinlan |