WormBase Tree Display for Variation: WBVar00228891
expand all nodes | collapse all nodes | view schema
| WBVar00228891 | Name | Public_name | WBVar00228891 | ||
|---|---|---|---|---|---|
| Other_name | pas40667 | ||||
| cewivar00114595 | |||||
| CE38114:p.Ile52= | |||||
| Y113G7B.9.1:c.156A>T | |||||
| HGVSg | CHROMOSOME_V:g.20206871A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y113G7B | |
| Flanking_sequences | aaaagcgagctttgctataagttctgataattttaaaatacatatacttacgacgtattatatattttatgtaaaactaataattttctaaaaaaaattatggagattatcatacaacttttgtgtttgctgggaattatcagtgcaattattacaattctgctcaacatcaatttggttgtgaaaattgttttgtaagcttttaaatatagtttctatctgaaaaaaatactatttcaggaatccatctaaacgaaaaaatgacatgtatcttttctattaccgttttactctcgacat | ttttttggagccggttgtaagttgttggcttaggcgtaggtttaagcttaggcataggcttaaacttaggctttcgcttaagcttagtcttcagcacctcttccttcatttctaagcttgattaaaaattccagtattctcctacattgcatacactcttctgaatatggaagctcccgaattcatgtttcaataccgtagcctaattgtcttgttggcgcttccatggtcacacatttccacgtgcagatctataattgctctttcaatctcgattgatagaagtatcgccacatgttt | |||
| Mapping_target | Y113G7B | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (25) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00013760 | |||
| Transcript | Y113G7B.9.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y113G7B.9.1:c.156A>T | ||||
| HGVSp | CE38114:p.Ile52= | ||||
| cDNA_position | 508 | ||||
| CDS_position | 156 | ||||
| Protein_position | 52 | ||||
| Exon_number | 3/7 | ||||
| Codon_change | atA/atT | ||||
| Amino_acid_change | I | ||||
| Method | WGS_Pasadena_Quinlan |
