WormBase Tree Display for Variation: WBVar00228219
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| WBVar00228219 | Name | Public_name | WBVar00228219 | ||
|---|---|---|---|---|---|
| Other_name | pas39995 | ||||
| cewivar00094003 | |||||
| F33H1.1a.1:c.706-211A>C | |||||
| F33H1.1e.1:c.280-211A>C | |||||
| F33H1.1c.1:c.232-211A>C | |||||
| F33H1.1d.1:c.349-211A>C | |||||
| F33H1.1b.1:c.781-211A>C | |||||
| HGVSg | CHROMOSOME_II:g.10160032T>G | ||||
| Sequence_details | SMap | S_parent | Sequence | F33H1 | |
| Flanking_sequences | tggaaatacttactttttgtagtgatcgtagagttcacatcttggcagcgacccttctccaatctcgtaattctcgaagagccagttcacctgaaaaccaagaacatacagtgtgtgttttaaccaaactcttatattctacatatatgtattccctaattcattaataaactcacatgaagttttgaatcagtaatcagtccgtctagcgacgaaccatcgagcaatgtcatgaagctcagtaacagataaccgcagagcacactctcacatctacacgcatatgctttttaagcgatg | cacaccaaataaaaaaaagagaagaaaaattcccccttcttcgtcttctatctcatttttctcatcctcttttctcgggatgagaggtaaacgaagagatggatgatgaacacacgaagatggtggttgctattggcagccaagaaaaagatgtcttcgtgtttgttgcataaataatatgccaggaaattcgaatgtgaaaaaaaattagttgaaatagtgggcggcgtttggtccgttccacacaaaaagaaaagtagcgaatagctaaaaagagttcaggtaaggaaaagggtcccc | |||
| Mapping_target | F33H1 | ||||
| Type_of_mutation | Substitution | T | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00000914 | |||
| Transcript | F33H1.1c.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F33H1.1c.1:c.232-211A>C | ||||
| Intron_number | 4/8 | ||||
| F33H1.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F33H1.1a.1:c.706-211A>C | ||||
| Intron_number | 7/12 | ||||
| F33H1.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F33H1.1b.1:c.781-211A>C | ||||
| Intron_number | 8/13 | ||||
| F33H1.1e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F33H1.1e.1:c.280-211A>C | ||||
| Intron_number | 3/7 | ||||
| F33H1.1d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F33H1.1d.1:c.349-211A>C | ||||
| Intron_number | 5/10 | ||||
| Method | WGS_Pasadena_Quinlan |
