WormBase Tree Display for Variation: WBVar00227814
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| WBVar00227814 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00227814 | |||
| Other_name | pas39590 | ||||
| cewivar00093317 | |||||
| C06C3.8c.1:c.94+90T>A | |||||
| HGVSg | CHROMOSOME_II:g.9392571A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C06C3 | |
| Flanking_sequences | tttttcactaatcatgatacaagacacattcctaaacccgataggtagtcaaaaatcaccgagattggctacctatcgggtttaactgtatcttaatcaaagaaataagatgatgttccgaattcgtttaatattttcatagctttccgttgatacaagttccgtagggcaaagatgcggcgcgcgcttttgcaagccaccgcatgcttcccgtatttatttgttcctctgtcaagatgttgaaaaaaagaaaaacataaattggaaaaaagcgacctgcgtcgcacctttgcccaatgg | aatcgaattcagggaaaattgtctctagtgaaagtgtacacctctaggatgcatcatttttaaatgagttgaaggatttgaaaattaaccaagttgaactatatgcgcatctctcccatcgacaaccaccacacctacagcttcggctccaactctctttttctgtaaaccaaaattagtggattgcagtcaactactttgattgaatcatataagagaccataaaactcacttcactatttggtttttccatgacagcgcagtttatactaacaatgacgatttccttctaaaaattaa | |||
| Mapping_target | C06C3 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (42) | |||||
| Laboratory | QX | ||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01439077 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00007378 | |||
| Transcript | C06C3.8c.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C06C3.8c.1:c.94+90T>A | ||||
| Intron_number | 2/11 | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
