WormBase Tree Display for Variation: WBVar00226600
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| WBVar00226600 | Name | Public_name | WBVar00226600 | ||
|---|---|---|---|---|---|
| Other_name | pas38376 | ||||
| cewivar00050262 | |||||
| CE21697:p.Ser194= | |||||
| Y39B6A.11.1:c.582C>T | |||||
| HGVSg | CHROMOSOME_V:g.19129544C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y39B6A | |
| Flanking_sequences | gatcacaaaattttgcacattttttcagttaaaaactttcttccaactttatttttaaaaaagttataagcatttgaaaatttcaaatttcaaaaaaaaaaaatttgttaaaaaatttttttttttgatttttgacctaaaatcgataaaattaatcgatttttctcggttttttacccaaaaaatctaaaaaatttcagatctccgtctaaacctcaccgaaaacgcagcggagccccaaatcgaccatttagagcaagcgcgggctcacctatcccgtataaatctcaccgagacctc | ccaattgccacgcccaccgaagagcgaaaaatcgatatttcaatgacggaaaaccacgagaaattgctcgccgagatgcgtgctcaggctccgcccaccacccacgtcacttttcaagaggctccgcccactcagacggtggtaccgcccgttttgcaggaagctccgcctgtcatagccccgcctaccgagccagtggccccgcccacttccacacaagctccgcccattgcggcacaggccccgcccacttcttcggtgtcaaatttgttggcacaacttgccggcggtagtgatagc | |||
| Mapping_target | Y39B6A | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (26) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00012673 | |||
| Transcript | Y39B6A.11.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y39B6A.11.1:c.582C>T | ||||
| HGVSp | CE21697:p.Ser194= | ||||
| cDNA_position | 587 | ||||
| CDS_position | 582 | ||||
| Protein_position | 194 | ||||
| Exon_number | 6/8 | ||||
| Codon_change | tcC/tcT | ||||
| Amino_acid_change | S | ||||
| Method | WGS_Pasadena_Quinlan |
