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WormBase Tree Display for Variation: WBVar00225051

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Name Class

WBVar00225051EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00225051
Other_namepas36827
cewivar00090902
F54H5.4b.2:c.-61+448G>A
HGVSgCHROMOSOME_II:g.6617439G>A
Sequence_detailsSMapS_parentSequenceF54H5
Flanking_sequencesgcctctatcttcgcttttcacacttagatttcctaaacattttgttatatttcatggtacatgttaacttaaactaataaagatgatatggttacattttttgtggttgctacttgctggtcagtctcggaattttttaagtttgacccaaaaaattaaattcaaactattatgttttgtgagctcaatattccacaattgaattactgttcgtcaacccttctgcctttgttgatttcatatcagcatttgcctcagaaaataattttgcaaaactctgtgaccaccaaaaagttacaaacataattgaaaaccctcatcattttgttcaataggtctttctcaattggttgtgataaaacatcaccagttgcaagatttattgttttgatcgacaccggggtgaagtaatactgtacatttgcagctaatctaggcacttttactgaacttttttgtctgtgggtagaaatctgtgtgcataaaacaaaaaaggtttttcttgtagctttcaatcataccaaatttctactgccttaagagcatgcatagatcccctcgaggggtcctgtttaaaactattccaaattgatcttttta
Mapping_targetF54H5
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (28)
LaboratoryAX
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01240509
WBVar01306920
StatusLive
AffectsGeneWBGene00003480
TranscriptF54H5.4b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF54H5.4b.2:c.-61+448G>A
Intron_number1/8
ReferenceWBPaper00037807
MethodWGS_Pasadena_Quinlan