WormBase Tree Display for Variation: WBVar00225005
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| WBVar00225005 | Name | Public_name | WBVar00225005 | ||
|---|---|---|---|---|---|
| Other_name | pas36781 | ||||
| haw131034 | |||||
| cewivar00090837 | |||||
| K10B2.5.1:c.1488T>C | |||||
| CE02012:p.Ala496= | |||||
| HGVSg | CHROMOSOME_II:g.6363357A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | K10B2 | |
| Flanking_sequences | tctccgttttagcacatccttccttgtcagagacacgatattccgcaacagattggccagcgtgaggtgtaacgagagtgggagagcgtgtgaattgaggaccactagacgaagcactataacctgtaccatcttcttcaaactcctgcatgtatggtgtggtctgaaaacttcagaataagcattataacaagtcagtccactcacgtctttctcgaattcaatttcctggtatgtgttcgtcgacaaatccaatctatttctgatcatcttgtttggacttttctgagatttaacttc | gcataaccatcaactgtacgttcaagcgtagttttgtcatcataatctccagtcggaacttcaacaaagtcgaacatctcatcaattttatcacaagtgcgctcttctggtatatcagaaaatggaagactctgacgcatagtaatcgctcttggtgtcaacaaaatttcgtcagtttggtccattccttccctatccacattcctcgattgttttttaataggaagagaataaagaacttcttcattgctctctccatagggcacatgatttttctttgcataaccactaattcccatg | |||
| Mapping_target | K10B2 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (170) | |||||
| Laboratory | QX | ||||
| AX | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01240453 | |||
| WBVar01372504 | |||||
| WBVar00550899 | |||||
| WBVar01306864 | |||||
| WBVar01438143 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00019608 | |||
| Transcript | K10B2.5.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | K10B2.5.1:c.1488T>C | ||||
| HGVSp | CE02012:p.Ala496= | ||||
| cDNA_position | 1576 | ||||
| CDS_position | 1488 | ||||
| Protein_position | 496 | ||||
| Exon_number | 9/14 | ||||
| Codon_change | gcT/gcC | ||||
| Amino_acid_change | A | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00040707 | |||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
