WormBase Tree Display for Variation: WBVar00223950
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WBVar00223950 | Name | Public_name | WBVar00223950 | ||
---|---|---|---|---|---|
Other_name | pas35726 | ||||
cewivar00090661 | |||||
H41C03.2.1:c.811-59C>T | |||||
HGVSg | CHROMOSOME_II:g.5850681G>A | ||||
Sequence_details | SMap | S_parent | Sequence | H41C03 | |
Flanking_sequences | tgataattataaaaagtttgatcaaacaaatacatgtgtgccaccggtttcttccaccaagatcctttcaaacaatattctgtttcaggctgattacatattttatagttatccacagccatgtgacttccataaaatatttcaaaactattatgatgagctgtctcgattgtttgtgacacacggaacggcgcgtcgggcacaaaatcgccgtctcgaacaacgcgaaactcctcgaaaacctggaattttcaaatttttggaacgattaaaggtactttttggtgatttgaggaggcg | ccgtactagacaactgtacagaatgccttttccgaattcaggcaaaaaagaaaattatttttaaaatgttccgacgtctagaacaaaacactttcactcccctttaaaaactttttgaaatcgcttacatgttctctcagaagtttcacaaatgtttcatctccgcttcgtggtgcagacattgaatataaactagtcttcttctgtggatatttgagagcaacatgaagtgagaatatagtagccatagctccaccaagagaatgcccagtgattaacattgaatacgatggatactct | |||
Mapping_target | H41C03 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (137) | |||||
Laboratory | QX | ||||
AX | |||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01437979 | |||
WBVar01372095 | |||||
WBVar01306486 | |||||
Status | Live | ||||
Affects | Gene | WBGene00019269 | |||
Transcript | H41C03.2.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | H41C03.2.1:c.811-59C>T | ||||
Intron_number | 5/6 | ||||
Reference | WBPaper00040707 | ||||
WBPaper00037807 | |||||
Method | WGS_Pasadena_Quinlan |