WormBase Tree Display for Variation: WBVar00223269
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WBVar00223269 | Name | Public_name | WBVar00223269 | ||
---|---|---|---|---|---|
Other_name | pas35045 | ||||
cewivar00119001 | |||||
R11.2.1:c.*238C>T | |||||
HGVSg | CHROMOSOME_X:g.16185156C>T | ||||
Sequence_details | SMap | S_parent | Sequence | R11 | |
Flanking_sequences | aagaagtcgtacccgcgtaattgctacttctcacccattcaatgcctcttcacacgtaactaggatgcctatatacagccgatcatctctttccatagaacgctttcttcttcttcttcatcatcttctcactctctctcttcgaaatgtcataactttgtgatcaagagtcattccaattccccctcttccatccctcactcaacacctaccgtttcgcccatctcctcgtccccttttttcttttctccaactctttttttcaattgtcatatattctcccccaaaatcccctctttc | gaaaatcttcctactctgaaagctccgatctcgtcttgcggcagtcgcatagcaaaaagttgcgggtcgcaaaacccttaccattcgaaatccaattctgttctgttctgttccataatgagcaacaaaatgaatgaacgttatctgcatatatacagtacattgaaaacaaaacaagagagtcatctctcactgtttgttcttaaatagttccgtgtagcctcccccttaccaatttcttatcacctcccgattttttcttccaaaagtacccccccccccccaacacacacacacaca | |||
Mapping_target | R11 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (15) | |||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00011227 | |||
Transcript | R11.2.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | R11.2.1:c.*238C>T | ||||
cDNA_position | 535 | ||||
Exon_number | 4/4 | ||||
Method | WGS_Pasadena_Quinlan |