WormBase Tree Display for Variation: WBVar00222183
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| WBVar00222183 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00222183 | |||
| Other_name | pas33959 | ||||
| cewivar00118585 | |||||
| F53H4.5.1:c.345A>G | |||||
| CE51716:p.Glu115= | |||||
| HGVSg | CHROMOSOME_X:g.15882168A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | F53H4 | |
| Flanking_sequences | accgactgagctatcctgtcctcttttttttttaaatttgactagaatttcaaaatcatagaaaaaatattaatggttgacttaaaattatgagaatctgagcaattgccattttttgtttgcagaggaacactttaaaaatggttgataatatttgaaaagttctgctatgatatttgatcaacttctaaaaatcattttccaggtaaaatgcggcactctaactgcaaaaatggtgacaaaactcttcacatgtcctggaatccatcaaaactgtatactgatcgatggtgaaacaga | tacattagccctaaggaattcactgtaagagcaaataaagacaagcagaaggactggaaagggagcatcagaatcggaaagtccaatcttcgaactttaatggagatgcggtctctcgactttcacgatcaccccaatcagtgctccgctaagtgtcagagcaggaattatattacaccaaaggatccgacttctgatccatcgttagtttctttcaaattaaaactgaattttgcatgtttatcttcttatttacaggggacgaaggcgttctagcacgaccaagttgatacctcaaaa | |||
| Mapping_target | F53H4 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (57) | |||||
| Laboratory | QX | ||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01473100 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00010010 | |||
| Transcript | F53H4.5.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F53H4.5.1:c.345A>G | ||||
| HGVSp | CE51716:p.Glu115= | ||||
| cDNA_position | 356 | ||||
| CDS_position | 345 | ||||
| Protein_position | 115 | ||||
| Exon_number | 3/8 | ||||
| Codon_change | gaA/gaG | ||||
| Amino_acid_change | E | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
