WormBase Tree Display for Variation: WBVar00220499
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| WBVar00220499 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00220499 | |||
| Other_name | pas32275 | ||||
| cewivar00088272 | |||||
| Y49F6B.6b.1:c.219A>G | |||||
| Y49F6B.6a.1:c.210A>G | |||||
| CE52689:p.Glu70= | |||||
| CE52751:p.Glu73= | |||||
| HGVSg | CHROMOSOME_II:g.3473383A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y49F6B | |
| Flanking_sequences | ctgcttccatccctgaatttccagtgccgcatctccaagatgaactggctctccatgttcattctacttgctgtaactgccatggccgccagccatggccagcgttggttccataagtttcacagaaacccagcttctgacgaagttcatggagatgtttggacccaggaaagacccttcgaggatgtggattcagatgaaatgtgagtgaacttgaacagtgtttgaatctcaaaaatatcttagtttcttaaggaattgggcgcagggccgtcgccgtcatggaaggcacggaagaga | agaattcgaactttggatttttgagtttaacttttttaagaaataaataatttatctattcattactatgcacttggacgttgaataaaattttgtgaaaaaaactagaaagttctgaaattctctaaggaaggtgtgtattcttaaaatatacaagtaggtattaagaaggcatgaacgcctgaagacgtgcaaaacgacagcgtgaaccttgaccaatcagcgacttgcgaagggcgtgtccaagctcgcttattggtccgaagctttgatgcctcgtatcttggttgtttttacttt | |||
| Mapping_target | Y49F6B | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (30) | |||||
| Laboratory | QX | ||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01436990 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00021718 | |||
| Transcript | Y49F6B.6b.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y49F6B.6b.1:c.219A>G | ||||
| HGVSp | CE52751:p.Glu73= | ||||
| cDNA_position | 224 | ||||
| CDS_position | 219 | ||||
| Protein_position | 73 | ||||
| Exon_number | 3/4 | ||||
| Codon_change | gaA/gaG | ||||
| Amino_acid_change | E | ||||
| Y49F6B.6a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y49F6B.6a.1:c.210A>G | ||||
| HGVSp | CE52689:p.Glu70= | ||||
| cDNA_position | 215 | ||||
| CDS_position | 210 | ||||
| Protein_position | 70 | ||||
| Exon_number | 3/4 | ||||
| Codon_change | gaA/gaG | ||||
| Amino_acid_change | E | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
