WormBase Tree Display for Variation: WBVar00218902
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| WBVar00218902 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00218902 | |||
| Other_name | pas30678 | ||||
| cewivar00116700 | |||||
| CE34173:p.Ile81= | |||||
| F16B12.4.1:c.243T>C | |||||
| HGVSg | CHROMOSOME_X:g.14097860A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | F16B12 | |
| Flanking_sequences | tactctttcttaaaagtttttactgttataaaaaacatacgctcttatatactttgtacatttctgcaaattaccattcagaaattttaacgtgctaaaaagcaaacggtgcctctcaggaggatcaggcgactagattatgtgtattgagcagtggcagtttttgtttattacgtgcgcaactagatgtttcattctgatcaaaaaattactcacaacttctgtcggaagaccagtctctcgcaaaactcggttcatatcattgtgagtgaacttgctgtcttctccggttggctgtag | atatactcatcgtcgtcgaattcatcacatttttcttcgataaaatcgggaatttcagcaaggttcctaaaaaataagtattggataagtggacaagaaaaccttggaaagctgttgaaatttttcggtattcctcttcgcttccaaatcgtggtctcaaagtgatcccataaaaaataaaaaactaattaaatttccttgaggaaatttcgattatttaaaaattttaatatatgtattagtggccgttatctaagtcatttgatagaattttctagaagagaagaaaaaaatataagc | |||
| Mapping_target | F16B12 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (53) | |||||
| Laboratory | QX | ||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01472333 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00008880 | |||
| Transcript | F16B12.4.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F16B12.4.1:c.243T>C | ||||
| HGVSp | CE34173:p.Ile81= | ||||
| cDNA_position | 256 | ||||
| CDS_position | 243 | ||||
| Protein_position | 81 | ||||
| Exon_number | 3/7 | ||||
| Codon_change | atT/atC | ||||
| Amino_acid_change | I | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
