WormBase Tree Display for Variation: WBVar00218572
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| WBVar00218572 | Evidence | Paper_evidence | WBPaper00005369 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00218572 | |||
| Other_name | pas30348 | ||||
| uCE6-1466 | |||||
| cewivar00062234 | |||||
| CE43213:p.Arg745His | |||||
| C44H4.4.1:c.2215+3615C>T | |||||
| C44H4.2.1:c.2234G>A | |||||
| HGVSg | CHROMOSOME_X:g.14580740G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | C44H4 | |
| Flanking_sequences | aattcgctctagcttcttcaaattccaatgagccaactctccaaccgcgtctcgaaaagtccttcttcacaacaactatcattttcatttgcgttggcacagccgttattgtgctcgttgtggttattgctggactttgtatcagtaagcacaggtatgtttgtattattgaatctgtttgtgggctataatttattaatttaaatttcagacagctacaattcgagaacacttattctgatagcagtgctgctagaaccagcgagtacatttcaactcaatacagacaaaattccctgc | tggcactggaggaagagttggacgatttgaagaatcaccagcctggatttacaatcctggatccagttattgcaattattacaaataatttcgcatttgtttgcattgcacacttccccatacatgtatttatcttcccaaaaacttgccgatctcttaataaatttttattaaattattatattgaaatcttgcaattggttcgcatagtacaatcaccacaagattcctatatccaaatagaaaagattaaaaaaatttagaaagtattcggtgacctaatttacccgctcagaaaaa | |||
| Mapping_target | C44H4 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (27) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| SNP_Swan | |||||
| History | Acquires_merge | WBVar00274738 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00002282 | |||
| WBGene00008094 | |||||
| Transcript | C44H4.4.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C44H4.4.1:c.2215+3615C>T | ||||
| Intron_number | 15/20 | ||||
| C44H4.2.1 (12) | |||||
| Reference | WBPaper00005369 | ||||
| Method | WGS_Pasadena_Quinlan |
