WormBase Tree Display for Variation: WBVar00217458
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| WBVar00217458 | Name | Public_name | WBVar00217458 | ||
|---|---|---|---|---|---|
| Other_name | pas29234 | ||||
| cewivar00075501 | |||||
| F58D5.2a.1:c.-193A>G | |||||
| HGVSg | CHROMOSOME_I:g.12068853T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | F58D5 | |
| Flanking_sequences | agtgtccaaagtgataattttccggcgccaaattatttgtttcgggtagaaatgttcaatattagcaccatcttgtaaatcttctgagatttgctcttcaatgtgcatcttttcctgaaaatttcgatttttggaaatggcgctccattgagaagggggtggtgggcgcggattgaaaggccacgttcacataatggacaatttttgttcaaattgttcaattcaaatactgtcaatagagcgctcctgcaacacaacattttttaaattgttaactaaaacttaatttttacacggatt | tcaaaacattagcaatagagcgtagttgcattttgaagattaaaaaaaatttttttttgctgtagagcgtatttgcaacatacaaatagtttgaaattttatgtgattttcaaaaaaaaaaagtagatttctcagtggagcgcacttgctttttttgcgattttatccctacaattggcgtaaaaaagcacgaaaaagtgaaaattcgctgagaaacgtagtaatctcagtagtaataacaataataaataaacggtagaaaagaaggcgaaactagtgactatatttaccctctcccac | |||
| Mapping_target | F58D5 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00010242 | |||
| Transcript | F58D5.2a.1 | VEP_consequence | 5_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F58D5.2a.1:c.-193A>G | ||||
| cDNA_position | 232 | ||||
| Exon_number | 1/6 | ||||
| Method | WGS_Pasadena_Quinlan |
