WormBase Tree Display for Variation: WBVar00217436
expand all nodes | collapse all nodes | view schema
| WBVar00217436 | Name | Public_name | WBVar00217436 | ||
|---|---|---|---|---|---|
| Other_name | pas29212 | ||||
| cewivar00075489 | |||||
| F58D5.1a.1:c.604-134C>A | |||||
| HGVSg | CHROMOSOME_I:g.12063758G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F58D5 | |
| Flanking_sequences | gcagccgcagcgtcttccttattacaatacgtgacaaaagcatatccacgggaagcaccggacattggatccatcataagacggagatcccagatttttccggatttctcgaagaggggaaccagggtgtcttcgaagacgtccgttggaatgtgtccgacgtagatctgaaaatggttgaataggtgagggtctcataaaaagagaattcgcaaaactgggatctggcagcggtagttttcttttaaagccatttttctcggatgcgcgttttttttcgaaattttaatccgaaaaaag | cacgaagcctcatgggcacggtctagagaaagcgaaacgtcggttgcaagttgcaagtctgcggcgcggtttttcggtctttttgctttttttcagtttagcgatagtaattttccgctaactttttcaacttgtaggttaaagctgagctatttttgatgaaaaatggccaagttttcacagtttttaccgttagagcgtctgaaggaactctgaaatctatagaaacttggcattgttttctgggcgaaaacgtggtcattttcctttaaaaatagctgaaaaaggaaataatcaagc | |||
| Mapping_target | F58D5 | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (106) | |||||
| Laboratory | QX | ||||
| AX | |||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01350747 | |||
| WBVar01286301 | |||||
| WBVar01425191 | |||||
| WBVar01433509 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00002000 | |||
| Transcript | F58D5.1a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F58D5.1a.1:c.604-134C>A | ||||
| Intron_number | 3/9 | ||||
| Reference | WBPaper00040707 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
