WormBase Tree Display for Variation: WBVar00217341
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WBVar00217341 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00217341 | |||
Other_name | pas29117 | ||||
cewivar00075579 | |||||
K11D2.1a.1:c.-139+2137C>T | |||||
K11D2.1b.1:c.12+2137C>T | |||||
HGVSg | CHROMOSOME_I:g.12499637C>T | ||||
Sequence_details | SMap | S_parent | Sequence | T27F6 | |
Flanking_sequences | ctgctggtggggaacgggagcggattgagagtttgcggaagaaattttgcattttgtcagaaattttgtagggctgaaatgataagttgtcgtgaagaaagaaaggaaagaagaaaagtgaggaagactcaaataaagaacgggaacacattcagaactttaaattctaccgcatataggcggcacgacggttctccacctcctcttaccgatcatcagaagtacaaaaacatatggtggttggaatgagataaaaaaatttgggagaataataataataataatcaacgacgattggaa | aagaatgatggatcaccggtggtgttgaatcggaaagcaattgggtgaagacagaggaaaggcgtcaaagtttagatattgtgagaattcggtgggggcggaacaagaagaacaggagaagcggaagccactgagaaggacgagaaaatgacaatcatgatgatgatgataatgatacaaagttgatcagtggcgcaaatggatcaaaagtcattcgtttttgagatgacgaagaaggagacgacggaatatgaaaaaccggatcagatttgcgaaaaaatggactaaaatgtataggga | |||
Mapping_target | T27F6 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (32) | |||||
Laboratory | QX | ||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01433844 | |||
Status | Live | ||||
Affects | Gene | WBGene00010768 | |||
Transcript | K11D2.1a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | K11D2.1a.1:c.-139+2137C>T | ||||
Intron_number | 1/5 | ||||
K11D2.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K11D2.1b.1:c.12+2137C>T | ||||
Intron_number | 2/4 | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Pasadena_Quinlan |