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WormBase Tree Display for Variation: WBVar00217341

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Name Class

WBVar00217341EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar00217341
Other_namepas29117
cewivar00075579
K11D2.1a.1:c.-139+2137C>T
K11D2.1b.1:c.12+2137C>T
HGVSgCHROMOSOME_I:g.12499637C>T
Sequence_detailsSMapS_parentSequenceT27F6
Flanking_sequencesctgctggtggggaacgggagcggattgagagtttgcggaagaaattttgcattttgtcagaaattttgtagggctgaaatgataagttgtcgtgaagaaagaaaggaaagaagaaaagtgaggaagactcaaataaagaacgggaacacattcagaactttaaattctaccgcatataggcggcacgacggttctccacctcctcttaccgatcatcagaagtacaaaaacatatggtggttggaatgagataaaaaaatttgggagaataataataataataatcaacgacgattggaaaagaatgatggatcaccggtggtgttgaatcggaaagcaattgggtgaagacagaggaaaggcgtcaaagtttagatattgtgagaattcggtgggggcggaacaagaagaacaggagaagcggaagccactgagaaggacgagaaaatgacaatcatgatgatgatgataatgatacaaagttgatcagtggcgcaaatggatcaaaagtcattcgtttttgagatgacgaagaaggagacgacggaatatgaaaaaccggatcagatttgcgaaaaaatggactaaaatgtataggga
Mapping_targetT27F6
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (32)
LaboratoryQX
PersonWBPerson6900
WBPerson1730
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01433844
StatusLive
AffectsGeneWBGene00010768
TranscriptK11D2.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK11D2.1a.1:c.-139+2137C>T
Intron_number1/5
K11D2.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK11D2.1b.1:c.12+2137C>T
Intron_number2/4
ReferenceWBPaper00040707
MethodWGS_Pasadena_Quinlan