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WormBase Tree Display for Variation: WBVar00216702

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Name Class

WBVar00216702NamePublic_nameWBVar00216702
Other_namepas28478
cewivar00115695
F09A5.4d.1:c.777+71G>A
F09A5.4b.2:c.858+71G>A
F09A5.4c.1:c.885+71G>A
F09A5.4b.1:c.858+71G>A
F09A5.4g.1:c.600+71G>A
F09A5.4e.1:c.807+71G>A
F09A5.4a.1:c.735+71G>A
HGVSgCHROMOSOME_X:g.13154107C>T
Sequence_detailsSMapS_parentSequenceF09A5
Flanking_sequencesatacaacattcaattcaaaaaattgcattaggtttttttttcaaattcacatcgcaattgttacaaaaaaaaactgactaagaaaactaagctaagaacttcaataccctctgctttagtttttttcttactggcaaaggctacaaacagacgaggtaatatacgataattatatataattaggaacactgatgggtgtggtttgacgactgtctggtcactgaacattcttttttttacaaattcaatacaatttgctgtggtttttcactaaaaaaacattttttacacaagacgttaatgtcaatgacgtttcgcattggttacgcatgtgatttacgtgacgaaactaatcaagctcaaaacaaacctccgtcacacattcgtcaacttgctcttgatctttggcatcgagcaggctgaatgtccttcccaactctgcaatatgcgcaaacacaattgcacattgggggcgaagttgcagtgcgccgagcacgtcccaatgtttcagatacatgtggcccatacagtgaaataagtggctgagcattttcttcaccgccggctcaaagttaccgttgaatttgttgcctggaaaaa
Mapping_targetF09A5
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000034From_analysisMillion_mutation_project_reanalysis
WBStrain00004604From_analysisWGS_Pasadena_Quinlan
WBStrain00006625From_analysisMillion_mutation_project_reanalysis
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00027647From_analysisMillion_mutation_project_reanalysis
WBStrain00031113From_analysisMillion_mutation_project_reanalysis
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00008601
TranscriptF09A5.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF09A5.4c.1:c.885+71G>A
Intron_number6/7
F09A5.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF09A5.4b.1:c.858+71G>A
Intron_number5/6
F09A5.4b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF09A5.4b.2:c.858+71G>A
Intron_number5/6
F09A5.4g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF09A5.4g.1:c.600+71G>A
Intron_number3/3
F09A5.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF09A5.4a.1:c.735+71G>A
Intron_number5/6
F09A5.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF09A5.4d.1:c.777+71G>A
Intron_number4/4
F09A5.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF09A5.4e.1:c.807+71G>A
Intron_number5/6
MethodWGS_Pasadena_Quinlan