WormBase Tree Display for Variation: WBVar00216622
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| WBVar00216622 | Name | Public_name | WBVar00216622 | ||
|---|---|---|---|---|---|
| Other_name | pas28398 | ||||
| cewivar00110192 | |||||
| Y39A1A.9.1:c.*441A>C | |||||
| HGVSg | CHROMOSOME_III:g.10630182T>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y39A1A | |
| Flanking_sequences | aacatttagtaattgatatatgtatttgtgttgtaattgactaattttttgtatcttatatgtttgtaaagttaacgactttcaaacccctgtcttgaaccttgccctctgccaaacgttactgggtaaacacctcgcttatctgtaattccatgttaaatatgtttttcatgttttttgtcgagtcaaataaaaacttttttattgaaccacacacagaggtggttatattcattgcaaaagaacacacgcacactgattttcaacaaccagattatgaaaaatttagtaataggagag | ttttcttagttgctgtggtgggaggagtggggggagaacgtaaaatcatatatcatcagtgatttaaatacatttgaatttgaaaaaagaagaggtggtgttgaagctgtaaatgaggaatactacgcgatactcggctagagggatattttacacacattgtgtattgaagctcaaatttgagaagagaagggaaaaaatcagtgcgcggacggagaaggaggtatacctttactaattttgtatatgtacagattcttgtgttgaggaatgagaagaggagaggctaaaatctagaaa | |||
| Mapping_target | Y39A1A | ||||
| Type_of_mutation | Substitution | T | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00012648 | |||
| Transcript | Y39A1A.9.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y39A1A.9.1:c.*441A>C | ||||
| cDNA_position | 1841 | ||||
| Exon_number | 6/6 | ||||
| Method | WGS_Pasadena_Quinlan |
