WormBase Tree Display for Variation: WBVar00216512
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| WBVar00216512 | Name | Public_name | WBVar00216512 | ||
|---|---|---|---|---|---|
| Other_name | pas28288 | ||||
| cewivar00110084 | |||||
| F43D9.1.1:c.2257-7A>T | |||||
| HGVSg | CHROMOSOME_III:g.10496380A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F43D9 | |
| Flanking_sequences | aaagccgaaaatttttggcaatttcctgaaatattcaattccggcaaaatgtctatttgccggaaattttcaattccggcaagttgccgatttgccggaaaaatcgtttgccgcccacccctgctatgtcccatatgaatacaaaccctataggctttcggctaaaatatcatgtttagacttcaggcctcatagacatttaccccataaatttttgacccttggggtgatgcaccatgtaccattgtctctggcccatggggtatccaaattttcgtatcaattcgtatttccccaaat | tttcaggctgaaggatacgcgacacgagctgtcaactggttggcggaattcgcaaaattcgaaaaagcgagcatctacgatgtgaatccggtgcgtttttttttcgttgtctttcttttttttaacgagccagcctgtttccatggagaaaaaagaattccaccttttcaggacacattcgtgccagtcgtcaatcttgtcttcctgccatcggagacctatcgaaaatatacttcagatattgtgatggatcgattccagactcagattatcaagtccagaatgtatttggaacttacc | |||
| Mapping_target | F43D9 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (28) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01448111 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00009653 | |||
| Transcript | F43D9.1.1 | VEP_consequence | splice_region_variant,intron_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F43D9.1.1:c.2257-7A>T | ||||
| Intron_number | 13/20 | ||||
| Method | WGS_Pasadena_Quinlan |
