WormBase Tree Display for Variation: WBVar00216360
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| WBVar00216360 | Name | Public_name | WBVar00216360 | ||
|---|---|---|---|---|---|
| Other_name | pas28136 | ||||
| snp_T07A5[1] | |||||
| cewivar00023491 | |||||
| T07A5.3.1:c.262-74G>C | |||||
| HGVSg | CHROMOSOME_III:g.10301222G>C | ||||
| Sequence_details | SMap | S_parent | Sequence | T07A5 | |
| Flanking_sequences | aatcagcactttcgtaaatcagcaaacccgcgaattgtcggacgctggccgtttaatttcaaacaattttcaagctataacaatcattagaacagtattacatttccagtaggatacaatagaaaatgttccccaaacttggtcagagaactggttttccggtaataaaaactgatatttaatgttttctttcttcttcaaaagttagattcggggggttattcgatgaaaggttatcttatcttcttttttttgaacagagggatctttggaatcagaaactaaaggatgattacctgg | aaacgtcggtcactttgttggccagcaagctccccgcgaaatgtcggctgctgaatttttatattgtttccaggaacgtgaattcttgtggacaggagctgaagttggaatgatggagagttcttttttctatggctacgctgcctcccaaattcccgccggtgtcctagccgccaaatttgcaccgaacaaaatcttcatgctaggaattctcgtcgcatctttcatgaacatactctccgcgatttccttcaactttcatccgtacactgacatttttgtgatggttgttcaagctgt | |||
| Mapping_target | T07A5 | ||||
| Type_of_mutation | Substitution | G | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (173) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01447980 | |||
| WBVar01447979 | |||||
| WBVar01267637 | |||||
| WBVar01332626 | |||||
| WBVar00246126 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00305587 | |||
| WBGene00011556 | |||||
| Transcript | T07A5.9 | ||||
| T07A5.3.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T07A5.3.1:c.262-74G>C | ||||
| Intron_number | 3/10 | ||||
| Reference | WBPaper00004703 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
