WormBase Tree Display for Variation: WBVar00215850
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| WBVar00215850 | Name | Public_name | WBVar00215850 | ||
|---|---|---|---|---|---|
| Other_name | pas27626 | ||||
| cewivar00109680 | |||||
| K03H1.12.1:c.297C>A | |||||
| CE46094:p.Ile99= | |||||
| HGVSg | CHROMOSOME_III:g.9942193C>A | ||||
| Sequence_details | SMap | S_parent | Sequence | K03H1 | |
| Flanking_sequences | ccaccgacgtttgtgaacgttccaccaccaccggcaggaatccagaaggacagaagtgtttccaaaaagtaagtgagaagaatttgattagtttacatcaatatagtataacctataaatatatttttgcagtgacaccactcctgaaccaaaagcgagtacaaaggacgcatcatccgtgcttatggatccagagaatgagaacaaaagcggctcttcaaaattgccacttgtggtactcaaacctttcaaaaaccaaaagctaataatttaatttcagattcgaattcttctcacaat | aacactatcctgttcctgatcgttctcgtcttctggttcttgacactcttcactggactccatttgatcaatatctccttcattaacaatatgtttaagtgaactcttcaataaattgtgatttatggaaataaagttcttaactttcccccaacatgtatttacagttttccaagattctttgaaacgaaaataaaattaaaacagctcgaaaatgtatcacatgttaaattacatagatgctgataccatgacggcagattttactccgggcgagaagagggcagagatgaggctggc | |||
| Mapping_target | K03H1 | ||||
| Type_of_mutation | Substitution | C | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (57) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01447761 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00010547 | |||
| Transcript | K03H1.12.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | K03H1.12.1:c.297C>A | ||||
| HGVSp | CE46094:p.Ile99= | ||||
| cDNA_position | 360 | ||||
| CDS_position | 297 | ||||
| Protein_position | 99 | ||||
| Exon_number | 5/6 | ||||
| Codon_change | atC/atA | ||||
| Amino_acid_change | I | ||||
| Method | WGS_Pasadena_Quinlan |
