WormBase Tree Display for Variation: WBVar00215704
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| WBVar00215704 | Name | Public_name | WBVar00215704 | ||
|---|---|---|---|---|---|
| Other_name | pas27480 | ||||
| cewivar00109311 | |||||
| F40F12.4.1:c.222T>C | |||||
| CE44107:p.Asn74= | |||||
| HGVSg | CHROMOSOME_III:g.9894864T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | F40F12 | |
| Flanking_sequences | tgcaaacgtgtcaccatacttttggcccaccctgtactaatttcaactcactttccaaaagtttaaaaaatcaatttttcgaactacagtagacctacagtaatcctacagtatccccacagttcctaagcttttttattcaatacgatggacgatttttttttcaaactttaactttcacttttccatttcactaacttgtcatttttcaggttcggagccaggactctcacgaccagcagtaactaataacaatatgtttccgtcaagtgttcgagcacgcggcgagaagaatacaaa | tttggaataccaaacggagtcatgaaatcaaataaggagatgtctgtttgtgagttttcaaactatatattccgaaaatgtttaatgtttactttcagctctcggtgttccatcctctccggcaatccttgatgcaagtgagctcaattgtttggagtttgatgaaacatgtcgatggagaaatgttgatggaatgtttgtggatgaacttgattggtatcaaggatctggagaattagatcaagatagattatcgattgcaactgctacaaatgtacttccacgtatgttttcttttct | |||
| Mapping_target | F40F12 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00009593 | |||
| Transcript | F40F12.4.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F40F12.4.1:c.222T>C | ||||
| HGVSp | CE44107:p.Asn74= | ||||
| cDNA_position | 222 | ||||
| CDS_position | 222 | ||||
| Protein_position | 74 | ||||
| Exon_number | 3/12 | ||||
| Codon_change | aaT/aaC | ||||
| Amino_acid_change | N | ||||
| Method | WGS_Pasadena_Quinlan |
