WormBase Tree Display for Variation: WBVar00214540
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WBVar00214540 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00214540 | |||
Other_name | pas26316 | ||||
cewivar00085595 | |||||
K02F6.9.2:c.721-20A>G | |||||
K02F6.9.1:c.721-20A>G | |||||
HGVSg | CHROMOSOME_II:g.2561248T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y47G7C | |
Flanking_sequences | tgctctttacaatgcagttctcacataaaaggttttccatcagctatcgcccaaaaactataacttacttcccgattttccccaaaaaagtactctccagccccatgaactgtcacccgctccaacagcttctcctcgtcctcttcactggttccatggcgcgccagcgccttcaaaatcttgatccaatcgatctccgggatcattttcacgagatccgtcagatttctcgatttcgacatgttatcattgtccagcgccaggtttctatagtcggcaagctcaaaaattggttggaaa | tgaaaaaaaataaactggatttagggaaaaaaataccgtggagaagttggcttcaagttgaacaagctctgcgaattccttgtcatagatcgtttcgttgagctcccggttttcaagttttagcaggcgtcggagcatctgaaaattgaagtttcctgcctgggcctcgttctaggccgcatgataagcttgcctagagtagcctggcctgacaaaagtccacgggcccagcaagagtccctagctcaggttcacctagtatctttcaggccgtacgaccgagtgggcctaggatcagcc | |||
Mapping_target | Y47G7C | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (51) | |||||
Laboratory | QX | ||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01436530 | |||
Status | Live | ||||
Affects | Gene | WBGene00019343 | |||
Transcript | K02F6.9.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | K02F6.9.2:c.721-20A>G | ||||
Intron_number | 7/14 | ||||
K02F6.9.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K02F6.9.1:c.721-20A>G | ||||
Intron_number | 7/14 | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Pasadena_Quinlan |