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WormBase Tree Display for Variation: WBVar00214476

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Name Class

WBVar00214476EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar00214476
Other_namepas26252
cewivar00085448
K02F6.7.1:c.*74T>G
K02F6.7.3:c.*74T>G
K02F6.7.2:c.*74T>G
HGVSgCHROMOSOME_II:g.2525275A>C
Sequence_detailsSMapS_parentSequenceF40B1
Flanking_sequencesgtgttcatcctcaattcctaaaaaaataacgaagtatagcctaaaaattttaacaaaaattcagcgaaaattcaaatttttttcaggagtgcaccaatggctcagtgggaatttccacgcttggctctaccaatcagaagaccggggttcgagccccgcggtggtaagaactttttcaaaaagcttctaggctaattcgcaagtgctgaattcaaattgtacacttttaaaaattgaaactaactgcaaatcttaaataatttcataaaataaagggaaataatccataatcatacaattgtttcacaatgagagaaaaaaaacacttgtataattatacgacatttaaattacaacgaaaaacatttaaaaatcagttctgatcctttgtggaatcctgctcacaagcgagattatcgagcgtctcctcaagctggcttatttgaatctctatatcagcatctttagcaaaagcatcagaatattcgataggaaggttgacgccatcggcgaatccagcagggtgcagacgcggatctctgaaaaaaatgatttagtaaaaaaatgttggcaacaaggccctcgtcaggccacgttttg
Mapping_targetF40B1
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (23)
LaboratoryQX
PersonWBPerson6900
WBPerson1730
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01436500
StatusLive
AffectsGeneWBGene00019341
TranscriptK02F6.7.2VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScK02F6.7.2:c.*74T>G
cDNA_position1714
Exon_number13/13
K02F6.7.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScK02F6.7.1:c.*74T>G
cDNA_position1624
Exon_number12/12
K02F6.7.3VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScK02F6.7.3:c.*74T>G
cDNA_position1715
Exon_number13/13
ReferenceWBPaper00040707
MethodWGS_Pasadena_Quinlan