WormBase Tree Display for Variation: WBVar00214476
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WBVar00214476 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00214476 | |||
Other_name | pas26252 | ||||
cewivar00085448 | |||||
K02F6.7.1:c.*74T>G | |||||
K02F6.7.3:c.*74T>G | |||||
K02F6.7.2:c.*74T>G | |||||
HGVSg | CHROMOSOME_II:g.2525275A>C | ||||
Sequence_details | SMap | S_parent | Sequence | F40B1 | |
Flanking_sequences | gtgttcatcctcaattcctaaaaaaataacgaagtatagcctaaaaattttaacaaaaattcagcgaaaattcaaatttttttcaggagtgcaccaatggctcagtgggaatttccacgcttggctctaccaatcagaagaccggggttcgagccccgcggtggtaagaactttttcaaaaagcttctaggctaattcgcaagtgctgaattcaaattgtacacttttaaaaattgaaactaactgcaaatcttaaataatttcataaaataaagggaaataatccataatcatacaatt | gtttcacaatgagagaaaaaaaacacttgtataattatacgacatttaaattacaacgaaaaacatttaaaaatcagttctgatcctttgtggaatcctgctcacaagcgagattatcgagcgtctcctcaagctggcttatttgaatctctatatcagcatctttagcaaaagcatcagaatattcgataggaaggttgacgccatcggcgaatccagcagggtgcagacgcggatctctgaaaaaaatgatttagtaaaaaaatgttggcaacaaggccctcgtcaggccacgttttg | |||
Mapping_target | F40B1 | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (23) | |||||
Laboratory | QX | ||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01436500 | |||
Status | Live | ||||
Affects | Gene | WBGene00019341 | |||
Transcript | K02F6.7.2 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | K02F6.7.2:c.*74T>G | ||||
cDNA_position | 1714 | ||||
Exon_number | 13/13 | ||||
K02F6.7.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K02F6.7.1:c.*74T>G | ||||
cDNA_position | 1624 | ||||
Exon_number | 12/12 | ||||
K02F6.7.3 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K02F6.7.3:c.*74T>G | ||||
cDNA_position | 1715 | ||||
Exon_number | 13/13 | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Pasadena_Quinlan |