WormBase Tree Display for Variation: WBVar00208698
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WBVar00208698 | Name | Public_name | WBVar00208698 | ||
---|---|---|---|---|---|
Other_name | haw75974 | ||||
cewivar00232816 | |||||
K11D12.10d.1:c.528+47T>C | |||||
Y58A7A.9:n.30T>C | |||||
K11D12.10b.1:c.528+47T>C | |||||
K11D12.10c.1:c.528+47T>C | |||||
K11D12.10a.1:c.528+47T>C | |||||
HGVSg | CHROMOSOME_V:g.5062620A>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y58A7A | |
Flanking_sequences | ttttgaagactaaaaattaagcctt | atttaatttctgatttcagtgctca | |||
Mapping_target | Y58A7A | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00197301 | |||
WBGene00003374 | |||||
Transcript | K11D12.10d.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | K11D12.10d.1:c.528+47T>C | ||||
Intron_number | 4/15 | ||||
K11D12.10b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K11D12.10b.1:c.528+47T>C | ||||
Intron_number | 5/17 | ||||
K11D12.10c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K11D12.10c.1:c.528+47T>C | ||||
Intron_number | 5/18 | ||||
Y58A7A.9 | VEP_consequence | non_coding_transcript_exon_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y58A7A.9:n.30T>C | ||||
cDNA_position | 30 | ||||
Exon_number | 1/1 | ||||
K11D12.10a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K11D12.10a.1:c.528+47T>C | ||||
Intron_number | 5/17 | ||||
Remark | [20081124 db] this Variation was previously named hw75974 | ||||
Method | WGS_Hawaiian_Waterston |