WormBase Tree Display for Variation: WBVar00206819
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WBVar00206819 | Name | Public_name | WBVar00206819 | ||
---|---|---|---|---|---|
Other_name | haw74095 | ||||
cewivar00229530 | |||||
T27C4.4d.1:c.*247T>C | |||||
T27C4.4e.1:c.2202+253T>C | |||||
T27C4.4a.1:c.2607+253T>C | |||||
T27C4.4b.2:c.2607+253T>C | |||||
T27C4.4b.1:c.2607+253T>C | |||||
HGVSg | CHROMOSOME_V:g.3710371T>C | ||||
Sequence_details | SMap | S_parent | Sequence | T27C4 | |
Flanking_sequences | gtcctattacggtttgatctacaaaaaatgcgggaatttt | agcctaaaaagagatgacgtcagca | |||
Mapping_target | T27C4 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00003025 | |||
Transcript | T27C4.4d.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T27C4.4d.1:c.*247T>C | ||||
cDNA_position | 2884 | ||||
Exon_number | 8/9 | ||||
T27C4.4b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T27C4.4b.2:c.2607+253T>C | ||||
Intron_number | 7/8 | ||||
T27C4.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T27C4.4a.1:c.2607+253T>C | ||||
Intron_number | 7/9 | ||||
T27C4.4e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T27C4.4e.1:c.2202+253T>C | ||||
Intron_number | 4/4 | ||||
T27C4.4b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T27C4.4b.1:c.2607+253T>C | ||||
Intron_number | 7/8 | ||||
Remark | [20081124 db] this Variation was previously named hw74095 | ||||
Method | WGS_Hawaiian_Waterston |