WormBase Tree Display for Variation: WBVar00205523
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WBVar00205523 | Name | Public_name | WBVar00205523 | ||
---|---|---|---|---|---|
Other_name | haw72799 | ||||
haw163273 | |||||
cewivar00227005 | |||||
F59D6.1a.2:c.-3+849A>T | |||||
F59D6.1c.1:c.-3+849A>T | |||||
F59D6.1a.1:c.-3+849A>T | |||||
HGVSg | CHROMOSOME_V:g.3047039A>T | ||||
Sequence_details | SMap | S_parent | Sequence | F59D6 | |
Flanking_sequences | attcctgaatctaatccttgaatta | tcatattctatgtacccaacaaatt | |||
Mapping_target | F59D6 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
Laboratory | RW | ||||
QX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01458756 | |||
WBVar00583138 | |||||
Status | Live | ||||
Affects | Gene | WBGene00019103 | |||
Transcript | F59D6.1c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F59D6.1c.1:c.-3+849A>T | ||||
Intron_number | 2/5 | ||||
F59D6.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F59D6.1a.1:c.-3+849A>T | ||||
Intron_number | 2/5 | ||||
F59D6.1a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F59D6.1a.2:c.-3+849A>T | ||||
Intron_number | 1/4 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00040707 | |||||
Remark | [20081124 db] this Variation was previously named hw72799 | ||||
Method | WGS_Hawaiian_Waterston |