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WormBase Tree Display for Variation: WBVar00202254

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Name Class

WBVar00202254NamePublic_nameWBVar00202254
Other_namehaw69530
cewivar00221428
Y50D4C.1b.1:c.441-1303G>A
Y50D4C.1e.1:c.60-1303G>A
Y50D4C.1d.1:c.453-1303G>A
Y50D4C.1c.1:c.483-1303G>A
Y50D4C.1a.1:c.483-1303G>A
HGVSgCHROMOSOME_V:g.988933G>A
Sequence_detailsSMapS_parentSequenceY50D4C
Flanking_sequencestaattttccaaaaaaaaatttgccgttatttgaaaattcaaaaatttaca
Mapping_targetY50D4C
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WBStrain00006640From_analysisMillion_mutation_project_reanalysis
WBStrain00022899From_analysisMillion_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00006770
TranscriptY50D4C.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY50D4C.1d.1:c.453-1303G>A
Intron_number2/5
Y50D4C.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY50D4C.1e.1:c.60-1303G>A
Intron_number1/4
Y50D4C.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY50D4C.1a.1:c.483-1303G>A
Intron_number3/7
Y50D4C.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY50D4C.1b.1:c.441-1303G>A
Intron_number2/2
Y50D4C.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY50D4C.1c.1:c.483-1303G>A
Intron_number3/3
Remark[20081124 db] this Variation was previously named hw69530
MethodWGS_Hawaiian_Waterston