WormBase Tree Display for Variation: WBVar00202254
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WBVar00202254 | Name | Public_name | WBVar00202254 | ||
---|---|---|---|---|---|
Other_name | haw69530 | ||||
cewivar00221428 | |||||
Y50D4C.1b.1:c.441-1303G>A | |||||
Y50D4C.1e.1:c.60-1303G>A | |||||
Y50D4C.1d.1:c.453-1303G>A | |||||
Y50D4C.1c.1:c.483-1303G>A | |||||
Y50D4C.1a.1:c.483-1303G>A | |||||
HGVSg | CHROMOSOME_V:g.988933G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y50D4C | |
Flanking_sequences | taattttccaaaaaaaaatttgccg | ttatttgaaaattcaaaaatttaca | |||
Mapping_target | Y50D4C | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00006770 | |||
Transcript | Y50D4C.1d.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y50D4C.1d.1:c.453-1303G>A | ||||
Intron_number | 2/5 | ||||
Y50D4C.1e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y50D4C.1e.1:c.60-1303G>A | ||||
Intron_number | 1/4 | ||||
Y50D4C.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y50D4C.1a.1:c.483-1303G>A | ||||
Intron_number | 3/7 | ||||
Y50D4C.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y50D4C.1b.1:c.441-1303G>A | ||||
Intron_number | 2/2 | ||||
Y50D4C.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y50D4C.1c.1:c.483-1303G>A | ||||
Intron_number | 3/3 | ||||
Remark | [20081124 db] this Variation was previously named hw69530 | ||||
Method | WGS_Hawaiian_Waterston |