WormBase Tree Display for Variation: WBVar00193272
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WBVar00193272 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00193272 | |||
Other_name | haw60548 | ||||
haw155288 | |||||
cewivar00210252 | |||||
JC8.10b.1:c.545+377T>C | |||||
JC8.10a.1:c.545+377T>C | |||||
JC8.10c.1:c.545+377T>C | |||||
JC8.10d.1:c.545+377T>C | |||||
HGVSg | CHROMOSOME_IV:g.13269815A>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y67H2A | |
Flanking_sequences | gatttttgtattatttttgtgtatt | ttgtaaaattctttttaaaaaataa | |||
Mapping_target | Y67H2A | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00575153 | |||
Status | Live | ||||
Affects | Gene | WBGene00006763 | |||
Transcript | JC8.10b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | JC8.10b.1:c.545+377T>C | ||||
Intron_number | 4/11 | ||||
JC8.10c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | JC8.10c.1:c.545+377T>C | ||||
Intron_number | 4/6 | ||||
JC8.10d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | JC8.10d.1:c.545+377T>C | ||||
Intron_number | 3/6 | ||||
JC8.10a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | JC8.10a.1:c.545+377T>C | ||||
Intron_number | 4/10 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw60548 | ||||
Method | WGS_Hawaiian_Waterston |