WormBase Tree Display for Variation: WBVar00193263
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WBVar00193263 | Name | Public_name | WBVar00193263 | ||
---|---|---|---|---|---|
Other_name | haw60539 | ||||
cewivar00210240 | |||||
JC8.10a.1:c.2256T>C | |||||
JC8.10b.1:c.2274T>C | |||||
CE29050:p.Leu758= | |||||
CE28239:p.Leu752= | |||||
HGVSg | CHROMOSOME_IV:g.13265226A>G | ||||
Sequence_details | SMap | S_parent | Sequence | JC8 | |
Flanking_sequences | aagcatcacagtatcctacctgtcc | agagctttctgctgtgtcaattgat | |||
Mapping_target | JC8 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00006763 | |||
Transcript | JC8.10b.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | JC8.10b.1:c.2274T>C | ||||
HGVSp | CE29050:p.Leu758= | ||||
cDNA_position | 2279 | ||||
CDS_position | 2274 | ||||
Protein_position | 758 | ||||
Exon_number | 8/12 | ||||
Codon_change | ctT/ctC | ||||
Amino_acid_change | L | ||||
JC8.10a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | JC8.10a.1:c.2256T>C | ||||
HGVSp | CE28239:p.Leu752= | ||||
cDNA_position | 2259 | ||||
CDS_position | 2256 | ||||
Protein_position | 752 | ||||
Exon_number | 7/11 | ||||
Codon_change | ctT/ctC | ||||
Amino_acid_change | L | ||||
Remark | [20081124 db] this Variation was previously named hw60539 | ||||
Method | WGS_Hawaiian_Waterston |