WormBase Tree Display for Variation: WBVar00192253
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WBVar00192253 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00192253 | |||
Other_name (12) | |||||
HGVSg | CHROMOSOME_IV:g.11992322T>C | ||||
Sequence_details | SMap | S_parent | Sequence | ZK617 | |
Flanking_sequences | aagaagttgtaagttgtagaagaac | taataccaaaaaataactaaccaag | |||
Mapping_target | ZK617 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (13) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00574441 | |||
Status | Live | ||||
Affects | Gene | WBGene00006759 | |||
Transcript | ZK617.1i.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZK617.1i.1:c.3571+22A>G | ||||
Intron_number | 21/32 | ||||
ZK617.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK617.1a.1:c.2689+22A>G | ||||
Intron_number | 20/32 | ||||
ZK617.1g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK617.1g.1:c.2716+22A>G | ||||
Intron_number | 20/31 | ||||
ZK617.1f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK617.1f.1:c.2953+22A>G | ||||
Intron_number | 19/30 | ||||
ZK617.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK617.1d.1:c.1528+22A>G | ||||
Intron_number | 10/21 | ||||
ZK617.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK617.1c.1:c.2029+22A>G | ||||
Intron_number | 14/25 | ||||
ZK617.1h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK617.1h.1:c.3598+22A>G | ||||
Intron_number | 22/33 | ||||
ZK617.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK617.1b.1:c.3646+22A>G | ||||
Intron_number | 22/33 | ||||
ZK617.1e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK617.1e.1:c.1477+22A>G | ||||
Intron_number | 9/20 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw59529 | ||||
Method | WGS_Hawaiian_Waterston |