WormBase Tree Display for Variation: WBVar00186713
expand all nodes | collapse all nodes | view schema
WBVar00186713 | Name | Public_name | WBVar00186713 | ||
---|---|---|---|---|---|
Other_name (12) | |||||
HGVSg | CHROMOSOME_IV:g.3049107C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y67D8C | |
Flanking_sequences | tccgcttgtttcaagtgaaaattcc | ggttttactgctaaaaagcatccaa | |||
Mapping_target | Y67D8C | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (123) | |||||
Laboratory | RW | ||||
QX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
SNP_Swan | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01451557 | |||
WBVar00270393 | |||||
WBVar00570774 | |||||
Status | Live | ||||
Affects | Gene | WBGene00022069 | |||
Transcript | Y67D8C.5g.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y67D8C.5g.1:c.640-150G>A | ||||
Intron_number | 2/15 | ||||
Y67D8C.5h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y67D8C.5h.1:c.640-144G>A | ||||
Intron_number | 2/14 | ||||
Y67D8C.5c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y67D8C.5c.1:c.640-150G>A | ||||
Intron_number | 3/16 | ||||
Y67D8C.5d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y67D8C.5d.1:c.640-144G>A | ||||
Intron_number | 2/14 | ||||
Y67D8C.5f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y67D8C.5f.1:c.640-144G>A | ||||
Intron_number | 2/14 | ||||
Y67D8C.5a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y67D8C.5a.1:c.640-150G>A | ||||
Intron_number | 3/16 | ||||
Y67D8C.5b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y67D8C.5b.1:c.640-144G>A | ||||
Intron_number | 2/14 | ||||
Y67D8C.5e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y67D8C.5e.1:c.640-150G>A | ||||
Intron_number | 2/15 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00040707 | |||||
WBPaper00005369 | |||||
Remark | [20081124 db] this Variation was previously named hw53989 | ||||
Method | WGS_Hawaiian_Waterston |