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WormBase Tree Display for Variation: WBVar00186577

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Name Class

WBVar00186577NamePublic_nameWBVar00186577
Other_namehaw53853
cewivar00036260
Y54G2A.36.4:c.-229G>A
Y54G2A.36.5:c.-275G>A
Y54G2A.36.1:c.-275G>A
Y54G2A.36.3:c.-275G>A
Y54G2A.36.2:c.-275G>A
HGVSgCHROMOSOME_IV:g.2900918G>A
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesttttagccattttcaaggttctggaaatcatctggtgaatcttccggcga
Mapping_targetY54G2A
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (26)
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021898
TranscriptY54G2A.36.2VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54G2A.36.2:c.-275G>A
cDNA_position127
Exon_number2/5
Y54G2A.36.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54G2A.36.1:c.-275G>A
cDNA_position153
Exon_number2/5
Y54G2A.36.5VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54G2A.36.5:c.-275G>A
cDNA_position2815
Exon_number1/4
Y54G2A.36.4VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54G2A.36.4:c.-229G>A
cDNA_position129
Exon_number2/6
Y54G2A.36.3VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54G2A.36.3:c.-275G>A
cDNA_position118
Exon_number2/5
Remark[20081124 db] this Variation was previously named hw53853
MethodWGS_Hawaiian_Waterston