Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00186389

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00186389EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00186389
Other_namehaw53665
haw150643
cewivar00035779
Y54G2A.11b.3:c.-15-636G>A
Y54G2A.11a.1:c.1210-636G>A
Y54G2A.11b.1:c.-651G>A
Y54G2A.11b.2:c.-15-636G>A
HGVSgCHROMOSOME_IV:g.2767160C>T
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesctaaattcaaatattaaattaaaatatgaagaaattcaaaataaactctt
Mapping_targetY54G2A
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (27)
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00570508
StatusLive
AffectsGeneWBGene00021876
TranscriptY54G2A.11b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.11b.3:c.-15-636G>A
Intron_number2/5
Y54G2A.11b.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54G2A.11b.1:c.-651G>A
cDNA_position2271
Exon_number4/7
Y54G2A.11a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.11a.1:c.1210-636G>A
Intron_number5/7
Y54G2A.11b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.11b.2:c.-15-636G>A
Intron_number3/6
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw53665
MethodWGS_Hawaiian_Waterston