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WormBase Tree Display for Variation: WBVar00183265

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Name Class

WBVar00183265NamePublic_nameWBVar00183265
Other_namehaw50541
cewivar00030643
Y55F3AM.3c.3:c.1209+518A>G
Y55F3AM.3a.1:c.1644+518A>G
Y55F3AM.3c.2:c.1209+518A>G
Y55F3AM.3c.1:c.1209+518A>G
Y55F3AM.3c.4:c.1209+518A>G
HGVSgCHROMOSOME_IV:g.1018240A>G
Sequence_detailsSMapS_parentSequenceY55F3AM
Flanking_sequencesactcaaaaattttcaatttttcaggttatggaggattttatgatcaaaaa
Mapping_targetY55F3AM
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
Origin (6)
AffectsGeneWBGene00021921
TranscriptY55F3AM.3c.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AM.3c.2:c.1209+518A>G
Intron_number5/6
Y55F3AM.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AM.3c.1:c.1209+518A>G
Intron_number8/9
Y55F3AM.3c.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AM.3c.4:c.1209+518A>G
Intron_number6/7
Y55F3AM.3c.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AM.3c.3:c.1209+518A>G
Intron_number6/7
Y55F3AM.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AM.3a.1:c.1644+518A>G
Intron_number7/8
Remark[20081124 db] this Variation was previously named hw50541
MethodWGS_Hawaiian_Waterston