WormBase Tree Display for Variation: WBVar00178631
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| WBVar00178631 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00178631 | |||
| Other_name | haw45907 | ||||
| haw145193 | |||||
| cewivar00110009 | |||||
| CE54079:p.Leu158= | |||||
| H04D03.4.1:c.474T>C | |||||
| HGVSg | CHROMOSOME_III:g.10448488A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | H04D03 | |
| Flanking_sequences | caatattactgacaccaagactttg | agcgatggaagcatttggctaatct | |||
| Mapping_target | H04D03 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | |||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00565058 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00010365 | |||
| Transcript | H04D03.4.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | H04D03.4.1:c.474T>C | ||||
| HGVSp | CE54079:p.Leu158= | ||||
| cDNA_position | 474 | ||||
| CDS_position | 474 | ||||
| Protein_position | 158 | ||||
| Exon_number | 3/6 | ||||
| Codon_change | ctT/ctC | ||||
| Amino_acid_change | L | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw45907 | ||||
| Method | WGS_Hawaiian_Waterston |
