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WormBase Tree Display for Variation: WBVar00173543

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Name Class

WBVar00173543NamePublic_nameWBVar00173543
Other_namepas37642
uCE2-1752
haw26793
cewivar00091933
F18A1.4b.1:c.763+121C>G
F18A1.4a.1:c.961+121C>G
HGVSgCHROMOSOME_II:g.7670036C>G
Sequence_detailsSMapS_parentSequenceF18A1
Flanking_sequencesagataaaactgaaaataaaacatcgaaaatcgagaaaaatgaaagaaatg
Mapping_targetF18A1
Type_of_mutationSubstitutionCG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (162)
LaboratoryRW
QX
AX
PersonWBPerson1562
WBPerson6900
WBPerson1730
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
SNP_Swan
WGS_Pasadena_Quinlan
WGS_Andersen
HistoryAcquires_mergeWBVar01438529
WBVar01308103
WBVar00225866
WBVar00268824
WBVar01241656
WBVar01373695
StatusLive
AffectsGeneWBGene00003045
TranscriptF18A1.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF18A1.4b.1:c.763+121C>G
Intron_number5/8
F18A1.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF18A1.4a.1:c.961+121C>G
Intron_number6/9
ReferenceWBPaper00040707
WBPaper00037807
WBPaper00005369
Remark[20081124 db] this Variation was previously named hw26793
MethodWGS_Hawaiian_Waterston