WormBase Tree Display for Variation: WBVar00172990

WBVar00172990 Name: Public_name: WBVar00172990
    Other_name: pas37061
      haw26240
      cewivar00091280
      C15F1.3a.1:c.2750+893T>A
      C15F1.3b.1:c.2750+893T>A
    HGVSg: CHROMOSOME_II:g.6960680A>T
  Sequence_details: SMap: S_parent: Sequence: C15F1
    Flanking_sequences: tgcacgatctaggttatacattttg gtgagcaggaacccaggtttaagat
    Mapping_target: C15F1
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (162)
    Laboratory: RW
      QX
      AX
    Person: WBPerson1562
      WBPerson6900
      WBPerson1730
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
      WGS_Andersen
    History: Acquires_merge: WBVar01438329
        WBVar00225285
        WBVar01240941
        WBVar01307320
        WBVar01372983
    Status: Live
  Affects: Gene: WBGene00006605
    Transcript: C15F1.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C15F1.3a.1:c.2750+893T>A
        Intron_number: 17/23
      C15F1.3b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C15F1.3b.1:c.2750+893T>A
        Intron_number: 17/21
  Reference: WBPaper00040707
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw26240
  Method: WGS_Hawaiian_Waterston