WormBase Tree Display for Variation: WBVar00172989

WBVar00172989 Name: Public_name: WBVar00172989
    Other_name: pas37060
      haw26239
      haw131275
      cewivar00091279
      C15F1.3b.1:c.2750+1015C>T
      C15F1.3a.1:c.2750+1015C>T
    HGVSg: CHROMOSOME_II:g.6960558G>A
  Sequence_details: SMap: S_parent: Sequence: C15F1
    Flanking_sequences: tatgtaatgctagaaataatattta aaaaacaaaaactctacaaatattt
    Mapping_target: C15F1
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (160)
    Laboratory: RW
      QX
      AX
    Person: WBPerson1562
      WBPerson6900
      WBPerson4037
      WBPerson1730
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
      WGS_Andersen
    History: Acquires_merge: WBVar00225284
        WBVar01240939
        WBVar01372982
        WBVar01438328
        WBVar01307319
        WBVar00551140
    Status: Live
  Affects: Gene: WBGene00006605
    Transcript: C15F1.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C15F1.3a.1:c.2750+1015C>T
        Intron_number: 17/23
      C15F1.3b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C15F1.3b.1:c.2750+1015C>T
        Intron_number: 17/21
  Reference: WBPaper00038208
    WBPaper00040707
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw26239
  Method: WGS_Hawaiian_Waterston