WormBase Tree Display for Variation: WBVar00162424

WBVar00162424 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00162424
    Other_name: haw15674
      cewivar00175127
      Y54E5A.6.1:c.-2+113T>A
      Y54E5A.8c.1:c.181-132A>T
      Y54E5A.8a.1:c.388-132A>T
    HGVSg: CHROMOSOME_I:g.14718106A>T
  Sequence_details: SMap: S_parent: Sequence: K05C4
    Flanking_sequences: ttctaacaaaatgaaaaaaaaaaaa atattcgtgactatggtagcttaaa
    Mapping_target: K05C4
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
      WBStrain00006629 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006642 From_analysis: WGS_De_Bono
      WBStrain00006643 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006645 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01356881
        WBVar01429395
    Status: Live
  Affects: Gene: WBGene00013203
      WBGene00013201
    Transcript: Y54E5A.6.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54E5A.6.1:c.-2+113T>A
        Intron_number: 1/8
      Y54E5A.8a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54E5A.8a.1:c.388-132A>T
        Intron_number: 5/7
      Y54E5A.8c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54E5A.8c.1:c.181-132A>T
        Intron_number: 2/3
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw15674
  Method: WGS_Hawaiian_Waterston