WormBase Tree Display for Variation: WBVar00154972
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| WBVar00154972 | Name | Public_name | WBVar00154972 | ||
|---|---|---|---|---|---|
| Other_name (12) | |||||
| HGVSg | CHROMOSOME_I:g.8204525T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | T02E1 | |
| Flanking_sequences | agtatcttccagacacccatagtct | aaaaccatgattcaaatttcacatt | |||
| Mapping_target | T02E1 | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00537905 | |||
| WBVar01346066 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00008570 | |||
| Transcript | F08A10.1h.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F08A10.1h.1:c.494-1747T>A | ||||
| Intron_number | 5/13 | ||||
| F08A10.1k.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F08A10.1k.1:c.680-1747T>A | ||||
| Intron_number | 8/16 | ||||
| F08A10.1e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F08A10.1e.1:c.596-1747T>A | ||||
| Intron_number | 6/14 | ||||
| F08A10.1f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F08A10.1f.1:c.593-1747T>A | ||||
| Intron_number | 12/21 | ||||
| F08A10.1f.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F08A10.1f.2:c.593-1747T>A | ||||
| Intron_number | 9/18 | ||||
| F08A10.1j.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F08A10.1j.1:c.1103-1747T>A | ||||
| Intron_number | 11/19 | ||||
| F08A10.1i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F08A10.1i.1:c.494-1747T>A | ||||
| Intron_number | 5/13 | ||||
| F08A10.1d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F08A10.1d.1:c.473-1747T>A | ||||
| Intron_number | 5/13 | ||||
| F08A10.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F08A10.1a.1:c.494-1747T>A | ||||
| Intron_number | 6/15 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw8222 | ||||
| Method | WGS_Hawaiian_Waterston |
