WormBase Tree Display for Variation: WBVar00154279
expand all nodes | collapse all nodes | view schema
WBVar00154279 | Name | Public_name | WBVar00154279 | ||
---|---|---|---|---|---|
Other_name | haw7529 | ||||
haw117590 | |||||
cewivar00166871 | |||||
ZK524.2j.1:c.58+301C>T | |||||
ZK524.2e.1:c.103+301C>T | |||||
ZK524.2d.1:c.103+301C>T | |||||
ZK524.2a.1:c.103+301C>T | |||||
ZK524.2f.1:c.103+301C>T | |||||
ZK524.2k.1:c.58+301C>T | |||||
ZK524.2i.1:c.103+301C>T | |||||
HGVSg | CHROMOSOME_I:g.7423288C>T | ||||
Sequence_details | SMap | S_parent | Sequence | C44E1 | |
Flanking_sequences | ggctcttccactttatgaatcatca | tttatctcaacaaaaaactattaac | |||
Mapping_target | C44E1 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00537455 | |||
WBVar01345235 | |||||
Status | Live | ||||
Affects | Gene | WBGene00006752 | |||
Transcript | ZK524.2f.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZK524.2f.1:c.103+301C>T | ||||
Intron_number | 2/29 | ||||
ZK524.2j.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK524.2j.1:c.58+301C>T | ||||
Intron_number | 2/28 | ||||
ZK524.2k.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK524.2k.1:c.58+301C>T | ||||
Intron_number | 2/28 | ||||
ZK524.2i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK524.2i.1:c.103+301C>T | ||||
Intron_number | 2/28 | ||||
ZK524.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK524.2a.1:c.103+301C>T | ||||
Intron_number | 2/29 | ||||
ZK524.2e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK524.2e.1:c.103+301C>T | ||||
Intron_number | 2/29 | ||||
ZK524.2d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK524.2d.1:c.103+301C>T | ||||
Intron_number | 2/30 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw7529 | ||||
Method | WGS_Hawaiian_Waterston |