WormBase Tree Display for Variation: WBVar00154021
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WBVar00154021 | Name | Public_name | WBVar00154021 | ||
---|---|---|---|---|---|
Other_name | uCE1-905 | ||||
haw7271 | |||||
cewivar00166592 | |||||
ZC308.1f.1:c.368-71G>T | |||||
ZC308.1c.1:c.1214-71G>T | |||||
ZC308.1e.1:c.647-71G>T | |||||
ZC308.1b.1:c.718+24G>T | |||||
ZC308.1a.2:c.1445-71G>T | |||||
ZC308.1a.1:c.1445-71G>T | |||||
HGVSg | CHROMOSOME_I:g.6382175G>T | ||||
Sequence_details | SMap | S_parent | Sequence | ZC308 | |
Flanking_sequences | gagtgagttatacgcgttattaaat | gtgttaaaaataggcaaaatatcat | |||
Mapping_target | ZC308 | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
WGS_De_Bono | |||||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
SNP_Swan | |||||
History | Acquires_merge | WBVar01344923 | |||
WBVar00267072 | |||||
Status | Live | ||||
Affects | Gene | WBGene00001596 | |||
Transcript | ZC308.1e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZC308.1e.1:c.647-71G>T | ||||
Intron_number | 5/12 | ||||
ZC308.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZC308.1a.1:c.1445-71G>T | ||||
Intron_number | 13/21 | ||||
ZC308.1a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZC308.1a.2:c.1445-71G>T | ||||
Intron_number | 12/20 | ||||
ZC308.1f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZC308.1f.1:c.368-71G>T | ||||
Intron_number | 3/10 | ||||
ZC308.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZC308.1b.1:c.718+24G>T | ||||
Intron_number | 2/10 | ||||
ZC308.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZC308.1c.1:c.1214-71G>T | ||||
Intron_number | 5/13 | ||||
Reference | WBPaper00037807 | ||||
WBPaper00005369 | |||||
Remark | [20081124 db] this Variation was previously named hw7271 | ||||
Method | WGS_Hawaiian_Waterston |